This project is no longer active and this site is provided for reference only. Please contact [email protected] for enquiries about the project.

Chemical Screening Resources

Resources and website mentioned during the course


 

http://zinc.docking.org - Free tools for ligand discovery

https://www.ebi.ac.uk/chembl/ - Open access and free med. chemistry SAR data

http://www.ebi.ac.uk/training/online/course/chembl-quick-tour - ChEMBL ‘Quick Tour’ e-learning tutorial from EBI Train Online
pCHEMBL score -this is -log(IC50,Ki,EC50) and attempts to put a number  of roughly comparable concentration dependent endpoints on a standard scale. This is a subset of possible measured bioactivities

https://www.ebi.ac.uk/unichem/ - UniChem resource

http://www.ebi.ac.uk/pdbe/ - PDBe (Protein DataBase Europe) is a database of 3D protein structures curated at the EBI

http://advisor.docking.org - Small molecule aggregation historical record database

http://sea.docking.org - Predict the biological targets of small molecules (e.g. from phenotypic hits)

http://eu.wiley.com/WileyCDA/WileyTitle/productCd-3527318526.html - Characterization of Chemical Space

http://smartsview.zbh.uni-hamburg.de/ - SMARTSviewer

http://cactus.nci.nih.gov/chemical/structure Chemical representation converters

https://registration.hinxton.wellcome.ac.uk/display_info.asp?id=386 - Someone asked if we run similar courses to this at EBI.  We run this one every year but it is closed for applications this year.

http://www.ebi.ac.uk/training/online/ - EBI Train Online

www.knime.org

http://www.slideshare.net/rguha/presentations - Rajashi Guha’s slideshare account. See what he would have presented